Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.15■□□□□ 0.5
Cbx3P23198 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Cbx3P23198 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cbx3P23198 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Cbx3P23198 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cbx3P23198 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cbx3P23198 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.14■□□□□ 0.5
Cbx3P23198 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cbx3P23198 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cbx3P23198 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Cbx3P23198 Terc-201ENSMUST00000082862 423 ntBASIC18.14■□□□□ 0.49
Cbx3P23198 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Cbx3P23198 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cbx3P23198 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cbx3P23198 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC18.14■□□□□ 0.49
Cbx3P23198 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.14■□□□□ 0.49
Cbx3P23198 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Cbx3P23198 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.13■□□□□ 0.49
Cbx3P23198 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
Cbx3P23198 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
Cbx3P23198 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.13■□□□□ 0.49
Cbx3P23198 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
Cbx3P23198 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cbx3P23198 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.12■□□□□ 0.49
Cbx3P23198 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.12■□□□□ 0.49
Cbx3P23198 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cbx3P23198 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cbx3P23198 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
Cbx3P23198 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cbx3P23198 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.11■□□□□ 0.49
Cbx3P23198 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.11■□□□□ 0.49
Cbx3P23198 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.11■□□□□ 0.49
Cbx3P23198 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cbx3P23198 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Cbx3P23198 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cbx3P23198 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.1■□□□□ 0.49
Cbx3P23198 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Cbx3P23198 Gm45364-201ENSMUST00000210883 159 ntBASIC18.1■□□□□ 0.49
Cbx3P23198 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cbx3P23198 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cbx3P23198 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cbx3P23198 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cbx3P23198 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
Cbx3P23198 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cbx3P23198 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cbx3P23198 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cbx3P23198 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms