Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TcraP01849 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TcraP01849 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC14.61□□□□□ -0.07
TcraP01849 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC14.61□□□□□ -0.07
TcraP01849 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TcraP01849 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TcraP01849 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TcraP01849 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
TcraP01849 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.6□□□□□ -0.07
TcraP01849 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
TcraP01849 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC14.6□□□□□ -0.07
TcraP01849 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TcraP01849 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TcraP01849 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.59□□□□□ -0.07
TcraP01849 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TcraP01849 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TcraP01849 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TcraP01849 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC14.59□□□□□ -0.07
TcraP01849 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.59□□□□□ -0.07
TcraP01849 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
TcraP01849 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
TcraP01849 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TcraP01849 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TcraP01849 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TcraP01849 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
TcraP01849 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC14.58□□□□□ -0.08
TcraP01849 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TcraP01849 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TcraP01849 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TcraP01849 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
TcraP01849 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TcraP01849 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TcraP01849 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TcraP01849 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TcraP01849 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
TcraP01849 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TcraP01849 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
TcraP01849 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
TcraP01849 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC14.56□□□□□ -0.08
TcraP01849 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.56□□□□□ -0.08
TcraP01849 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.56□□□□□ -0.08
TcraP01849 AC117769.4-201ENSMUST00000225679 685 ntBASIC14.56□□□□□ -0.08
TcraP01849 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC14.56□□□□□ -0.08
TcraP01849 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
TcraP01849 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms