Protein–RNA interactions for Protein: O09113

Otp, Homeobox protein orthopedia, mousemouse

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtpO09113 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
OtpO09113 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
OtpO09113 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
OtpO09113 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
OtpO09113 Golph3-202ENSMUST00000226517 2359 ntBASIC17.92■□□□□ 0.46
OtpO09113 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
OtpO09113 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
OtpO09113 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.92■□□□□ 0.46
OtpO09113 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Gm40881-201ENSMUST00000223397 166 ntBASIC17.91■□□□□ 0.46
OtpO09113 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Gm5812-201ENSMUST00000061073 957 ntBASIC17.91■□□□□ 0.46
OtpO09113 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.91■□□□□ 0.46
OtpO09113 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
OtpO09113 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.9■□□□□ 0.46
OtpO09113 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OtpO09113 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
OtpO09113 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.9■□□□□ 0.46
OtpO09113 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
OtpO09113 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.9■□□□□ 0.46
OtpO09113 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.9■□□□□ 0.46
OtpO09113 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
OtpO09113 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
OtpO09113 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
OtpO09113 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
OtpO09113 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
OtpO09113 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
OtpO09113 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.88■□□□□ 0.45
OtpO09113 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
OtpO09113 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Gm15546-201ENSMUST00000122095 826 ntBASIC17.87■□□□□ 0.45
OtpO09113 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.87■□□□□ 0.45
OtpO09113 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.87■□□□□ 0.45
OtpO09113 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
OtpO09113 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
OtpO09113 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
OtpO09113 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.86■□□□□ 0.45
OtpO09113 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
OtpO09113 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Iqck-206ENSMUST00000208658 2891 ntBASIC17.85■□□□□ 0.45
OtpO09113 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.85■□□□□ 0.45
OtpO09113 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.85■□□□□ 0.45
OtpO09113 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
OtpO09113 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
OtpO09113 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.85■□□□□ 0.45
OtpO09113 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OtpO09113 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
OtpO09113 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OtpO09113 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OtpO09113 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
OtpO09113 Gm42501-201ENSMUST00000200220 1026 ntBASIC17.84■□□□□ 0.45
OtpO09113 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
OtpO09113 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
OtpO09113 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.84■□□□□ 0.45
OtpO09113 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.84■□□□□ 0.45
OtpO09113 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.83■□□□□ 0.45
OtpO09113 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OtpO09113 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.83■□□□□ 0.45
OtpO09113 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OtpO09113 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
OtpO09113 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
OtpO09113 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
OtpO09113 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms