Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cldn20G5E8X0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cldn20G5E8X0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cldn20G5E8X0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Gm13238-201ENSMUST00000117655 780 ntBASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Gm45444-201ENSMUST00000211394 898 ntBASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cldn20G5E8X0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn20G5E8X0 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn20G5E8X0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn20G5E8X0 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cldn20G5E8X0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cldn20G5E8X0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
Cldn20G5E8X0 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cldn20G5E8X0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cldn20G5E8X0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.38■□□□□ 0.37
Cldn20G5E8X0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn20G5E8X0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn20G5E8X0 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.37■□□□□ 0.37
Cldn20G5E8X0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.37■□□□□ 0.37
Cldn20G5E8X0 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn20G5E8X0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cldn20G5E8X0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.37■□□□□ 0.37
Cldn20G5E8X0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms