Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Gm12887B1AVM1 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Gm12887B1AVM1 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm12887B1AVM1 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm12887B1AVM1 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Gm12887B1AVM1 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Gm12887B1AVM1 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Gm12887B1AVM1 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Gm12887B1AVM1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm12887B1AVM1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm12887B1AVM1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Gm12887B1AVM1 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Gm12887B1AVM1 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm12887B1AVM1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm12887B1AVM1 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Gm12887B1AVM1 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm12887B1AVM1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm12887B1AVM1 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm12887B1AVM1 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Gm12887B1AVM1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm12887B1AVM1 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Gm11687-201ENSMUST00000118911 886 ntBASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm12887B1AVM1 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm12887B1AVM1 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.19■□□□□ 0.18
Gm12887B1AVM1 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm12887B1AVM1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm12887B1AVM1 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm12887B1AVM1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Gm8093-201ENSMUST00000128935 1892 ntBASIC16.18■□□□□ 0.18
Gm12887B1AVM1 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms