Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igkv8-28A0A0G2JE47 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Igkv8-28A0A0G2JE47 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 AC167019.3-201ENSMUST00000228225 1266 ntBASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igkv8-28A0A0G2JE47 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm6311-201ENSMUST00000073790 878 ntBASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Pkd1-207ENSMUST00000228550 1050 ntBASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Igkv8-28A0A0G2JE47 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Igkv8-28A0A0G2JE47 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm37035-201ENSMUST00000194809 2148 ntBASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Igkv8-28A0A0G2JE47 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 73.2 ms