Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Igkv5-43A0A0B4J1J2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.69■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
Igkv5-43A0A0B4J1J2 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.68■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Igkv5-43A0A0B4J1J2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Igkv5-43A0A0B4J1J2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms