Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Gm10033-202ENSMUST00000211874 928 ntBASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Ighv3-4A0A0A6YXF1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm17641-201ENSMUST00000166328 2350 ntBASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.76■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.73■□□□□ 0.27
Ighv3-4A0A0A6YXF1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Mir6236-201ENSMUST00000184437 123 ntBASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ighv3-4A0A0A6YXF1 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Gm9988-201ENSMUST00000069786 435 ntBASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Ighv3-4A0A0A6YXF1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms