Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav9d-3A0A075B695 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav9d-3A0A075B695 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Trav9d-3A0A075B695 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav9d-3A0A075B695 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav9d-3A0A075B695 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav9d-3A0A075B695 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trav9d-3A0A075B695 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Dapk1-207ENSMUST00000226059 5009 ntBASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav9d-3A0A075B695 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms