Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav6-6A0A075B603 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav6-6A0A075B603 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav6-6A0A075B603 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6-6A0A075B603 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Gm44949-201ENSMUST00000206423 1450 ntBASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6-6A0A075B603 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6-6A0A075B603 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Gm5067-201ENSMUST00000170449 1009 ntBASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Gm38342-201ENSMUST00000195710 2980 ntBASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6-6A0A075B603 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6-6A0A075B603 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms