Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Gm32856-201ENSMUST00000212145 3767 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cchcr1Q8K2I2 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm4900-201ENSMUST00000222046 1628 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm38357-201ENSMUST00000195382 2464 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm15432-201ENSMUST00000121106 195 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Snord55-201ENSMUST00000174939 79 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Mipep-ps-201ENSMUST00000177439 291 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm9555-201ENSMUST00000200908 583 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Hcst-201ENSMUST00000075062 442 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Spaar-201ENSMUST00000131248 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.96□□□□□ -0.33
Cchcr1Q8K2I2 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cchcr1Q8K2I2 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Atxn1l-202ENSMUST00000212605 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Hint1-202ENSMUST00000117710 580 ntTSL 2 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm16166-201ENSMUST00000118291 787 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm10051-201ENSMUST00000145209 414 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm9445-201ENSMUST00000207454 1285 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 AC122035.1-201ENSMUST00000227576 1016 ntBASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cchcr1Q8K2I2 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cchcr1Q8K2I2 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms