Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm15352-201ENSMUST00000118696 270 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Gm4917-201ENSMUST00000121452 650 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC12.11□□□□□ -0.47
Ift88Q61371 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm7848-201ENSMUST00000210739 718 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm23105-201ENSMUST00000083719 134 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ift88Q61371 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 AC129336.2-201ENSMUST00000218053 3086 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Dlec1-208ENSMUST00000165231 5263 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Ahrr-201ENSMUST00000022059 4754 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.11□□□□□ -0.47
Ift88Q61371 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.11□□□□□ -0.47
Ift88Q61371 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Fos-201ENSMUST00000021674 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Ift88Q61371 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.1□□□□□ -0.47
Ift88Q61371 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ift88Q61371 Eapp-202ENSMUST00000110713 886 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.1□□□□□ -0.47
Ift88Q61371 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
Ift88Q61371 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.1□□□□□ -0.47
Ift88Q61371 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ift88Q61371 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ift88Q61371 Ginm1-202ENSMUST00000065124 300 ntBASIC12.1□□□□□ -0.47
Ift88Q61371 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Sema3b-203ENSMUST00000102530 3410 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ift88Q61371 Abca3-203ENSMUST00000117337 5202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Hrh1-201ENSMUST00000088987 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Tbc1d17-201ENSMUST00000047085 8750 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ift88Q61371 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Sema4g-201ENSMUST00000026225 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
Ift88Q61371 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 AC140462.2-201ENSMUST00000225718 2433 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Zdhhc3-208ENSMUST00000147563 6987 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm15808-201ENSMUST00000119046 604 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm15726-201ENSMUST00000144738 509 ntTSL 3 BASIC12.09□□□□□ -0.47
Ift88Q61371 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC12.09□□□□□ -0.47
Ift88Q61371 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ift88Q61371 Gm2383-201ENSMUST00000181461 807 ntBASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms