Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm28624-201ENSMUST00000186430 2131 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Gm7405-201ENSMUST00000121476 1337 ntBASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trim9Q8C7M3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm35021-201ENSMUST00000210105 2329 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Recql-202ENSMUST00000100832 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm26013-201ENSMUST00000104404 119 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm11451-201ENSMUST00000118946 630 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm15131-201ENSMUST00000119124 595 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm24398-201ENSMUST00000157870 109 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm7985-201ENSMUST00000183329 981 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm42859-201ENSMUST00000199572 193 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm8285-201ENSMUST00000208293 759 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm9102-201ENSMUST00000219250 465 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 AC154305.2-201ENSMUST00000225813 901 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 CT025679.1-201ENSMUST00000227106 449 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm43937-201ENSMUST00000204640 3122 ntBASIC12.09□□□□□ -0.47
Trim9Q8C7M3 Gm18294-201ENSMUST00000176980 1748 ntBASIC12.08□□□□□ -0.47
Trim9Q8C7M3 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trim9Q8C7M3 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Smok3a-201ENSMUST00000085886 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm23061-201ENSMUST00000102348 116 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12616-201ENSMUST00000118594 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Mir1893-201ENSMUST00000122565 83 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12624-201ENSMUST00000177615 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12621-201ENSMUST00000177760 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12615-201ENSMUST00000177970 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12622-201ENSMUST00000177975 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12627-201ENSMUST00000178412 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12625-201ENSMUST00000179122 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12614-201ENSMUST00000179586 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm12613-201ENSMUST00000180323 382 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm37852-201ENSMUST00000193027 350 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm44126-201ENSMUST00000204831 514 ntBASIC12.08□□□□□ -0.48
Trim9Q8C7M3 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trim9Q8C7M3 Gm45592-201ENSMUST00000209605 1043 ntBASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms