Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
IghmP01872 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.27□□□□□ -0.77
IghmP01872 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC10.27□□□□□ -0.77
IghmP01872 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC10.27□□□□□ -0.77
IghmP01872 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
IghmP01872 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC10.27□□□□□ -0.77
IghmP01872 Gm10263-201ENSMUST00000085163 300 ntBASIC10.27□□□□□ -0.77
IghmP01872 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
IghmP01872 Gm37697-201ENSMUST00000195680 1844 ntBASIC10.27□□□□□ -0.77
IghmP01872 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
IghmP01872 Amz1-202ENSMUST00000120630 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Zfp330-201ENSMUST00000034147 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
IghmP01872 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Vangl1-208ENSMUST00000168312 1740 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.27□□□□□ -0.77
IghmP01872 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
IghmP01872 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
IghmP01872 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 AC140462.2-201ENSMUST00000225718 2433 ntBASIC10.26□□□□□ -0.77
IghmP01872 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
IghmP01872 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC10.26□□□□□ -0.77
IghmP01872 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
IghmP01872 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.26□□□□□ -0.77
IghmP01872 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.26□□□□□ -0.77
IghmP01872 Gm6677-201ENSMUST00000195100 441 ntBASIC10.26□□□□□ -0.77
IghmP01872 Gm43163-201ENSMUST00000196571 442 ntBASIC10.26□□□□□ -0.77
IghmP01872 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC10.26□□□□□ -0.77
IghmP01872 Gm19091-201ENSMUST00000208120 978 ntBASIC10.26□□□□□ -0.77
IghmP01872 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.26□□□□□ -0.77
IghmP01872 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 AC115122.1-201ENSMUST00000224850 1040 ntBASIC10.26□□□□□ -0.77
IghmP01872 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Tcn2-206ENSMUST00000109992 1945 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC10.26□□□□□ -0.77
IghmP01872 Ywhaz-201ENSMUST00000022894 3288 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Gm11735-201ENSMUST00000106377 1581 ntBASIC10.26□□□□□ -0.77
IghmP01872 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
IghmP01872 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.26□□□□□ -0.77
IghmP01872 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
IghmP01872 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
IghmP01872 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.25□□□□□ -0.77
IghmP01872 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
IghmP01872 Zfp354b-201ENSMUST00000109124 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.25□□□□□ -0.77
IghmP01872 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
IghmP01872 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
IghmP01872 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
IghmP01872 Gm12663-201ENSMUST00000118481 958 ntBASIC10.25□□□□□ -0.77
IghmP01872 Gm12337-201ENSMUST00000119634 400 ntBASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms