Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Bco1-201ENSMUST00000034308 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Lysmd4Q8CC84 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Rims2-204ENSMUST00000226410 3685 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Ubash3a-201ENSMUST00000048656 2945 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Ccdc63-201ENSMUST00000058960 2299 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Upk1b-201ENSMUST00000057767 1769 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm10686-201ENSMUST00000215389 3247 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm15264-201ENSMUST00000118050 502 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm13461-201ENSMUST00000120980 662 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm24844-201ENSMUST00000158679 127 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm29499-201ENSMUST00000189151 486 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm28329-201ENSMUST00000191208 689 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm29171-201ENSMUST00000191397 486 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 AC125350.2-201ENSMUST00000224737 727 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 AC134860.1-201ENSMUST00000224867 660 ntBASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Vmn1r212-201ENSMUST00000095960 1164 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Il16-203ENSMUST00000145610 3183 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Gm45140-202ENSMUST00000204419 5061 ntAPPRIS P5 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Babam2-204ENSMUST00000114515 1497 ntTSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Ap4m1-201ENSMUST00000019662 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 4931423N10Rik-201ENSMUST00000028113 1842 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Cage1-203ENSMUST00000110233 2875 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Lysmd4Q8CC84 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Crry-ps-201ENSMUST00000079090 1309 ntBASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Fga-202ENSMUST00000166581 2587 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Arhgap36-202ENSMUST00000114904 3033 ntAPPRIS P2 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Vipas39-202ENSMUST00000072744 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm26083-201ENSMUST00000157904 193 ntBASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm23694-201ENSMUST00000179335 110 ntBASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Polr1d-204ENSMUST00000200993 1167 ntTSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
Lysmd4Q8CC84 Mir219a-1-201ENSMUST00000083621 110 ntBASIC9.83□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms