Protein–RNA interactions for Protein: J3QJW5

Cldn34c3, Claudin 34C3, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn34c3J3QJW5 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Plxnb3-201ENSMUST00000002079 6030 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm24891-201ENSMUST00000104391 136 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm14058-201ENSMUST00000116082 735 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm22711-201ENSMUST00000116890 133 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm37246-201ENSMUST00000192665 835 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm8574-201ENSMUST00000203207 924 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Ntng1-201ENSMUST00000051253 327 ntBASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Ano1-202ENSMUST00000118556 4566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Mtmr7-205ENSMUST00000174205 2679 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Cldn34c3J3QJW5 Utrn-206ENSMUST00000219003 5751 ntTSL 5 BASIC8.84□□□□□ -1
Cldn34c3J3QJW5 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cldn34c3J3QJW5 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -1
Cldn34c3J3QJW5 Chd7-206ENSMUST00000170391 3462 ntTSL 5 BASIC8.84□□□□□ -1
Cldn34c3J3QJW5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC8.84□□□□□ -1
Cldn34c3J3QJW5 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Mgll-204ENSMUST00000113585 3676 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Oas3-201ENSMUST00000044833 4720 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Cspg4-201ENSMUST00000035661 8121 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Ldb3-205ENSMUST00000090040 4981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Mir877-201ENSMUST00000104738 85 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm4294-201ENSMUST00000105169 614 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm13809-201ENSMUST00000117921 597 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm12266-201ENSMUST00000120311 962 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm11450-201ENSMUST00000121144 333 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm14017-201ENSMUST00000121934 386 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm21778-201ENSMUST00000178779 471 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm28450-201ENSMUST00000187349 638 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm43058-201ENSMUST00000197645 625 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm42588-201ENSMUST00000200538 1297 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 CT573047.1-201ENSMUST00000223652 851 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 CT025694.1-201ENSMUST00000226188 934 ntBASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Cldn34c3J3QJW5 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms