Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Pde6b-201ENSMUST00000031456 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm24954-201ENSMUST00000178831 110 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm7985-201ENSMUST00000183329 981 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm8384-201ENSMUST00000190905 704 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm6606-201ENSMUST00000193613 947 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm42660-201ENSMUST00000197733 947 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm7904-201ENSMUST00000217049 465 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 AC137871.1-201ENSMUST00000228278 475 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Gm13615-201ENSMUST00000120242 1612 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 AC137950.2-202ENSMUST00000227150 1635 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.09□□□□□ -0.63
Pcdhga6Q91XY2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Pcdhga6Q91XY2 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Gpatch2l-204ENSMUST00000221368 4355 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Gm2448-201ENSMUST00000207080 559 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Gm5996-201ENSMUST00000211110 718 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Gm42427-201ENSMUST00000200473 5292 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Pcdhga6Q91XY2 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Olfr239-202ENSMUST00000213731 3690 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Rpl22-204ENSMUST00000139685 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Pcdhga6Q91XY2 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms