Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm15020-201ENSMUST00000147142 636 ntTSL 3 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Ccr6-204ENSMUST00000167956 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Erg-209ENSMUST00000177450 1280 ntTSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm7833-201ENSMUST00000183288 990 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm28391-201ENSMUST00000185202 379 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm29528-201ENSMUST00000186699 379 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm29526-201ENSMUST00000187217 379 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm9736-201ENSMUST00000219969 834 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Rpl9-201ENSMUST00000057885 738 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Olfr47-201ENSMUST00000078057 1059 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Mir194-2-201ENSMUST00000083648 86 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Bpifb1-201ENSMUST00000028987 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Hmox1-201ENSMUST00000005548 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 4930447F24Rik-201ENSMUST00000194140 1341 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Gm4865-201ENSMUST00000196284 1309 ntBASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Elmod3-202ENSMUST00000114069 2164 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Dhdds-209ENSMUST00000144668 3219 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Nup98Q6PFD9 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm5335-201ENSMUST00000182995 1000 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm27444-201ENSMUST00000184157 137 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm44388-201ENSMUST00000204350 258 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Fxyd1-214ENSMUST00000206328 545 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Als2cr12-206ENSMUST00000191565 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 AC159810.1-201ENSMUST00000214838 1480 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm10537-201ENSMUST00000192625 1698 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Pex13-ps-201ENSMUST00000118184 1157 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm12489-201ENSMUST00000119364 148 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm14231-201ENSMUST00000120090 592 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm16226-204ENSMUST00000162639 423 ntTSL 3 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm5976-201ENSMUST00000180794 996 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm6216-201ENSMUST00000182390 687 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm17796-201ENSMUST00000189015 1213 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm37944-201ENSMUST00000194233 414 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm42208-201ENSMUST00000198215 670 ntTSL 3 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 AC125409.3-201ENSMUST00000223488 653 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 AC139155.1-201ENSMUST00000226043 444 ntBASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Nup98Q6PFD9 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms