Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Myom2-201ENSMUST00000033842 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm7895-201ENSMUST00000187459 1173 ntBASIC12.27□□□□□ -0.45
Tpm1P58771 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.27□□□□□ -0.45
Tpm1P58771 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC12.27□□□□□ -0.45
Tpm1P58771 AC112945.1-201ENSMUST00000226413 514 ntBASIC12.27□□□□□ -0.45
Tpm1P58771 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC12.27□□□□□ -0.45
Tpm1P58771 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Kcnip3-203ENSMUST00000103215 2732 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Kcnip3-201ENSMUST00000028850 2728 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.27□□□□□ -0.45
Tpm1P58771 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC12.27□□□□□ -0.45
Tpm1P58771 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Tpm1P58771 Gm43143-201ENSMUST00000196083 2023 ntBASIC12.27□□□□□ -0.45
Tpm1P58771 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Tpm1P58771 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Osmr-201ENSMUST00000022746 5491 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Fer1l5-202ENSMUST00000179162 6315 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Tcp10a-203ENSMUST00000129709 1778 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 AC124732.3-201ENSMUST00000221835 1765 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 St6galnac4-201ENSMUST00000102818 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
Tpm1P58771 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC12.26□□□□□ -0.45
Tpm1P58771 Gm8566-201ENSMUST00000120174 465 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.26□□□□□ -0.45
Tpm1P58771 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC12.26□□□□□ -0.45
Tpm1P58771 Gm44967-201ENSMUST00000207047 631 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Gm45433-201ENSMUST00000209386 247 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Gm8913-201ENSMUST00000209491 641 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Gm25857-201ENSMUST00000082788 129 ntBASIC12.26□□□□□ -0.45
Tpm1P58771 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tpm1P58771 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Tns3-201ENSMUST00000020695 7483 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Tpm1P58771 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.26□□□□□ -0.45
Tpm1P58771 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC12.26□□□□□ -0.45
Tpm1P58771 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Tpm1P58771 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Tpm1P58771 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm10417-201ENSMUST00000194341 3522 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Gm44103-201ENSMUST00000204364 3662 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 G3bp1-201ENSMUST00000018727 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Cacna2d1-204ENSMUST00000115281 3412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Slc5a9-201ENSMUST00000102719 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.25□□□□□ -0.45
Tpm1P58771 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm5302-201ENSMUST00000202130 796 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Gm8342-201ENSMUST00000209839 757 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tpm1P58771 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 9430064I24Rik-201ENSMUST00000206516 2669 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm3372-201ENSMUST00000198806 1792 ntBASIC12.25□□□□□ -0.45
Tpm1P58771 Lhx9-202ENSMUST00000046870 3645 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm43713-201ENSMUST00000198251 1896 ntTSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Tpm1P58771 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Tpm1P58771 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC12.25□□□□□ -0.45
Tpm1P58771 Gm43307-201ENSMUST00000199465 2371 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms