Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NUP98P52948 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NUP98P52948 AC004522.1-201ENST00000419978 654 ntBASIC17.11■□□□□ 0.33
NUP98P52948 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC17.11■□□□□ 0.33
NUP98P52948 AK2-208ENST00000487289 920 ntTSL 2 BASIC17.11■□□□□ 0.33
NUP98P52948 CXXC1P1-202ENST00000489409 1212 ntBASIC17.11■□□□□ 0.33
NUP98P52948 BCDIN3D-AS1-202ENST00000549124 468 ntTSL 3 BASIC17.11■□□□□ 0.33
NUP98P52948 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC17.11■□□□□ 0.33
NUP98P52948 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NUP98P52948 DGAT2L7P-201ENST00000602462 744 ntBASIC17.11■□□□□ 0.33
NUP98P52948 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 AC007191.1-201ENST00000623179 2995 ntBASIC17.11■□□□□ 0.33
NUP98P52948 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NUP98P52948 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
NUP98P52948 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
NUP98P52948 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.11■□□□□ 0.33
NUP98P52948 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AL357373.1-201ENST00000394974 322 ntBASIC17.1■□□□□ 0.33
NUP98P52948 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
NUP98P52948 PLA2G1B-202ENST00000423423 423 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 AC012358.2-201ENST00000430010 1434 ntBASIC17.1■□□□□ 0.33
NUP98P52948 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC17.1■□□□□ 0.33
NUP98P52948 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 CCND3P2-201ENST00000579393 537 ntBASIC17.1■□□□□ 0.33
NUP98P52948 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 CSTP2-201ENST00000610599 398 ntBASIC17.1■□□□□ 0.33
NUP98P52948 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC17.1■□□□□ 0.33
NUP98P52948 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NUP98P52948 AC099328.1-201ENST00000498809 1030 ntBASIC17.1■□□□□ 0.33
NUP98P52948 RPSAP70-201ENST00000504462 864 ntBASIC17.1■□□□□ 0.33
NUP98P52948 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.1■□□□□ 0.33
NUP98P52948 AC113347.2-201ENST00000512350 279 ntBASIC17.1■□□□□ 0.33
NUP98P52948 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC17.1■□□□□ 0.33
NUP98P52948 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC17.1■□□□□ 0.33
NUP98P52948 AP000553.2-201ENST00000609038 441 ntBASIC17.1■□□□□ 0.33
NUP98P52948 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NUP98P52948 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NUP98P52948 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP98P52948 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NUP98P52948 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP98P52948 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC17.09■□□□□ 0.33
NUP98P52948 KRT8P25-201ENST00000473150 1456 ntBASIC17.09■□□□□ 0.33
NUP98P52948 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.09■□□□□ 0.33
NUP98P52948 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NUP98P52948 UCP2-202ENST00000536983 1413 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms