Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 A930006I01Rik-201ENSMUST00000139065 2229 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm45675-201ENSMUST00000211202 3429 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Col8a2P25318 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Col8a2P25318 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm12274-201ENSMUST00000120062 385 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm14219-201ENSMUST00000120414 288 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13022-201ENSMUST00000121181 285 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13445-201ENSMUST00000121664 307 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm20414-201ENSMUST00000172918 646 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Rn7s6-201ENSMUST00000175005 291 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm20781-201ENSMUST00000193154 693 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm21736-201ENSMUST00000195399 693 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm6439-201ENSMUST00000199849 862 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm43506-201ENSMUST00000200675 753 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC9.19□□□□□ -0.94
Col8a2P25318 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm35713-201ENSMUST00000210516 199 ntBASIC9.19□□□□□ -0.94
Col8a2P25318 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Col8a2P25318 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Triml2-202ENSMUST00000209200 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Cops3-201ENSMUST00000019517 1646 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Col8a2P25318 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Col8a2P25318 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.19□□□□□ -0.94
Col8a2P25318 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Col8a2P25318 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC9.18□□□□□ -0.94
Col8a2P25318 Gm15784-201ENSMUST00000120260 1462 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Gm4917-201ENSMUST00000121452 650 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC9.18□□□□□ -0.94
Col8a2P25318 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 Rnf6-206ENSMUST00000161859 3452 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 Tmprss5-202ENSMUST00000165088 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Col8a2P25318 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC9.18□□□□□ -0.94
Col8a2P25318 A930003O13Rik-202ENSMUST00000197486 3098 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC9.18□□□□□ -0.94
Col8a2P25318 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Gm44106-201ENSMUST00000203153 1599 ntBASIC9.18□□□□□ -0.94
Col8a2P25318 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms