Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC11.97□□□□□ -0.49
CD74P04233 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC11.97□□□□□ -0.49
CD74P04233 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC11.97□□□□□ -0.49
CD74P04233 AC093004.1-201ENST00000508850 424 ntBASIC11.97□□□□□ -0.49
CD74P04233 HNRNPA1P13-201ENST00000510646 963 ntBASIC11.97□□□□□ -0.49
CD74P04233 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
CD74P04233 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.97□□□□□ -0.49
CD74P04233 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AC021016.3-201ENST00000608367 477 ntBASIC11.97□□□□□ -0.49
CD74P04233 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC11.97□□□□□ -0.49
CD74P04233 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 NUDT9-203ENST00000473942 2458 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 MARK2P16-201ENST00000605714 1723 ntBASIC11.97□□□□□ -0.49
CD74P04233 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CD74P04233 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.97□□□□□ -0.49
CD74P04233 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 SLC6A9-205ENST00000372310 3130 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CD74P04233 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 LINC00638-201ENST00000555578 2518 ntBASIC11.96□□□□□ -0.49
CD74P04233 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
CD74P04233 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 AL590824.1-201ENST00000403828 1349 ntBASIC11.96□□□□□ -0.49
CD74P04233 SHMT1P1-201ENST00000419974 1312 ntBASIC11.96□□□□□ -0.49
CD74P04233 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 AC103592.1-201ENST00000394513 664 ntBASIC11.96□□□□□ -0.49
CD74P04233 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 MIR943-201ENST00000401286 94 ntBASIC11.96□□□□□ -0.49
CD74P04233 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC11.96□□□□□ -0.49
CD74P04233 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC11.96□□□□□ -0.49
CD74P04233 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 CD81-207ENST00000481687 890 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.96□□□□□ -0.49
CD74P04233 IGHV3-42-201ENST00000520410 361 ntBASIC11.96□□□□□ -0.49
CD74P04233 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.96□□□□□ -0.49
CD74P04233 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CD74P04233 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC11.96□□□□□ -0.49
CD74P04233 AC004449.1-201ENST00000564240 433 ntBASIC11.96□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms