Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 AL136309.1-201ENST00000403917 691 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC112492.5-201ENST00000421897 457 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC078819.1-201ENST00000547454 765 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC012085.1-201ENST00000548270 765 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 RPL28-206ENST00000558752 671 ntTSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC233724.13-201ENST00000598383 410 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 AL358472.3-201ENST00000608147 415 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AL136301.1-201ENST00000615830 422 ntBASIC14.39□□□□□ -0.11
RAPH1Q70E73 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 TOMM40L-209ENST00000545897 2807 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.39□□□□□ -0.11
RAPH1Q70E73 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RAPH1Q70E73 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AL805961.2-201ENST00000642139 4817 ntBASIC14.38□□□□□ -0.11
RAPH1Q70E73 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AL928654.5-201ENST00000624831 2501 ntBASIC14.38□□□□□ -0.11
RAPH1Q70E73 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 TTTY23B-201ENST00000442790 549 ntBASIC14.38□□□□□ -0.11
RAPH1Q70E73 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 COQ6-210ENST00000554920 649 ntTSL 3 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 AC008735.3-201ENST00000596646 500 ntBASIC14.38□□□□□ -0.11
RAPH1Q70E73 AC244669.2-201ENST00000612320 853 ntBASIC14.38□□□□□ -0.11
RAPH1Q70E73 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RAPH1Q70E73 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
RAPH1Q70E73 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms