Protein–RNA interactions for Protein: Q80XJ2

Rnf168, E3 ubiquitin-protein ligase RNF168, mousemouse

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf168Q80XJ2 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf168Q80XJ2 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf168Q80XJ2 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Rnf168Q80XJ2 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
Rnf168Q80XJ2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm9244-201ENSMUST00000056767 2129 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm15617-201ENSMUST00000118973 771 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm18776-201ENSMUST00000188833 654 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm29067-201ENSMUST00000190821 470 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm44323-201ENSMUST00000198689 129 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 CT573086.4-201ENSMUST00000226729 342 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Furin-201ENSMUST00000107362 4166 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Rnf168Q80XJ2 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Mir453-201ENSMUST00000104732 82 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Mir1905-201ENSMUST00000122779 82 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm8451-201ENSMUST00000170338 447 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm4862-201ENSMUST00000170405 438 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm5621-201ENSMUST00000187303 640 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm9353-201ENSMUST00000200472 604 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm5599-201ENSMUST00000209602 788 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 AC154361.2-201ENSMUST00000224747 943 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm7536-201ENSMUST00000077389 444 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Gm5453-201ENSMUST00000080866 447 ntBASIC11.88□□□□□ -0.51
Rnf168Q80XJ2 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms