Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTPN3P26045 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN3P26045 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTPN3P26045 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN3P26045 PFN1P12-201ENST00000455938 534 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN3P26045 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN3P26045 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.51□□□□□ -0.09
PTPN3P26045 AL118558.3-201ENST00000607414 1079 ntBASIC14.51□□□□□ -0.09
PTPN3P26045 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.51□□□□□ -0.09
PTPN3P26045 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PTPN3P26045 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.51□□□□□ -0.09
PTPN3P26045 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTPN3P26045 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PTPN3P26045 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PTPN3P26045 RPL13AP3-202ENST00000494676 1473 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 BRD7P5-201ENST00000299197 1822 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
PTPN3P26045 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 ACTBP11-201ENST00000436287 1126 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 AC011742.3-201ENST00000439053 820 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 AC004898.1-201ENST00000451057 766 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 AC125604.1-201ENST00000496255 707 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 CFL1-212ENST00000531413 636 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 AC093752.3-201ENST00000567343 901 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 SYT17-208ENST00000568433 812 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.5□□□□□ -0.09
PTPN3P26045 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 AL451050.2-201ENST00000606967 682 ntBASIC14.5□□□□□ -0.09
PTPN3P26045 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PTPN3P26045 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.5□□□□□ -0.09
PTPN3P26045 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
PTPN3P26045 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 MARK2P9-201ENST00000430958 1727 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.49□□□□□ -0.09
PTPN3P26045 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PTPN3P26045 LINC01165-201ENST00000445190 1623 ntBASIC14.49□□□□□ -0.09
PTPN3P26045 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.49□□□□□ -0.09
PTPN3P26045 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms