Protein–RNA interactions for Protein: P09225

Lta, Lymphotoxin-alpha, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtaP09225 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gm43931-201ENSMUST00000204817 2870 ntBASIC9.08□□□□□ -0.96
LtaP09225 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gm44913-201ENSMUST00000208060 2990 ntBASIC9.08□□□□□ -0.96
LtaP09225 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gm37613-201ENSMUST00000195677 3580 ntBASIC9.08□□□□□ -0.96
LtaP09225 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
LtaP09225 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.08□□□□□ -0.96
LtaP09225 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC9.08□□□□□ -0.96
LtaP09225 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.07□□□□□ -0.96
LtaP09225 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC9.07□□□□□ -0.96
LtaP09225 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC9.07□□□□□ -0.96
LtaP09225 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Gm14398-201ENSMUST00000117287 1073 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm12899-201ENSMUST00000120565 551 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm13117-201ENSMUST00000120894 691 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC9.07□□□□□ -0.96
LtaP09225 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC9.07□□□□□ -0.96
LtaP09225 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC9.07□□□□□ -0.96
LtaP09225 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Gm4753-201ENSMUST00000188327 1255 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm8197-202ENSMUST00000193422 934 ntBASIC9.07□□□□□ -0.96
LtaP09225 Gm30671-201ENSMUST00000214898 318 ntBASIC9.07□□□□□ -0.96
LtaP09225 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC9.07□□□□□ -0.96
LtaP09225 AC122346.3-201ENSMUST00000223983 306 ntBASIC9.07□□□□□ -0.96
LtaP09225 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 1810009A15Rik-201ENSMUST00000096251 806 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.07□□□□□ -0.96
LtaP09225 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
LtaP09225 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC9.07□□□□□ -0.96
LtaP09225 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
LtaP09225 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
LtaP09225 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.06□□□□□ -0.96
LtaP09225 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LtaP09225 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Best1-201ENSMUST00000117346 2080 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
LtaP09225 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
LtaP09225 Gm43152-201ENSMUST00000202495 1638 ntBASIC9.06□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms