Protein–RNA interactions for Protein: Q9DC53

Cpne8, Copine-8, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne8Q9DC53 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cpne8Q9DC53 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Sh3gl2-204ENSMUST00000107189 3231 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm16071-201ENSMUST00000119589 793 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm16219-201ENSMUST00000120096 274 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm17826-201ENSMUST00000189720 798 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm43667-201ENSMUST00000198616 1095 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm44100-201ENSMUST00000204329 436 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Cthrc1-201ENSMUST00000067072 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm6768-201ENSMUST00000022467 1878 ntBASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Plekhb1-205ENSMUST00000107046 2793 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm46355-201ENSMUST00000221434 1671 ntTSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Gpc4-201ENSMUST00000033450 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Cpne8Q9DC53 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Mkks-202ENSMUST00000110089 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Ttc39a-202ENSMUST00000106618 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Mir6979-201ENSMUST00000183927 56 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm38321-201ENSMUST00000195053 235 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm37466-201ENSMUST00000195692 652 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Mt1-202ENSMUST00000211807 1085 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm9111-201ENSMUST00000219394 709 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 AC159103.1-201ENSMUST00000228325 429 ntBASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Gm28035-201ENSMUST00000139454 4238 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Cpne8Q9DC53 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Dnajc14-202ENSMUST00000217745 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Cpne8Q9DC53 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 76.5 ms