Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm12530-201ENSMUST00000152074 1759 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Lime1-202ENSMUST00000108804 960 ntTSL 3 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Mir1941-201ENSMUST00000157834 83 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm5254-201ENSMUST00000188353 977 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm9723-201ENSMUST00000192100 457 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 AC155300.1-201ENSMUST00000219134 480 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 AC154354.1-203ENSMUST00000225565 1364 ntBASIC13.92□□□□□ -0.18
Nkx2-3P97334 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Hspa2-201ENSMUST00000080449 2524 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-3P97334 Edn1-201ENSMUST00000021796 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 AC153524.2-202ENSMUST00000220401 1794 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Nmrk2-201ENSMUST00000005069 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Cdc25a-204ENSMUST00000198308 2880 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Gm45206-201ENSMUST00000206885 2285 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Gm12418-201ENSMUST00000118116 942 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Gm13688-201ENSMUST00000121557 608 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Gm23582-201ENSMUST00000158530 139 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Gm5808-201ENSMUST00000178090 357 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 Ywhaq-ps1-201ENSMUST00000206623 710 ntBASIC13.91□□□□□ -0.18
Nkx2-3P97334 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-3P97334 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm25288-201ENSMUST00000122800 265 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 3010001F23Rik-201ENSMUST00000130625 876 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm5526-201ENSMUST00000153604 423 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm7627-201ENSMUST00000183205 999 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm28032-201ENSMUST00000184104 96 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Mir6953-201ENSMUST00000184745 68 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm27316-201ENSMUST00000184884 277 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 AC154585.1-201ENSMUST00000218917 997 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm3926-201ENSMUST00000223378 1123 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Gm25514-201ENSMUST00000083860 135 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 4930517J16Rik-201ENSMUST00000193095 1568 ntBASIC13.9□□□□□ -0.18
Nkx2-3P97334 Rep15-201ENSMUST00000036194 1662 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-3P97334 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms