Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ddr1-202ENSMUST00000097333 3593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.1□□□□□ -0.95
VhlP40338 Gm6092-201ENSMUST00000121659 2029 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm5525-201ENSMUST00000190438 1312 ntBASIC9.1□□□□□ -0.95
VhlP40338 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Acot11-202ENSMUST00000102762 5689 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm24255-201ENSMUST00000104481 128 ntBASIC9.1□□□□□ -0.95
VhlP40338 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm11941-201ENSMUST00000119904 610 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm7985-201ENSMUST00000183329 981 ntBASIC9.1□□□□□ -0.95
VhlP40338 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm28746-201ENSMUST00000187453 380 ntBASIC9.1□□□□□ -0.95
VhlP40338 Ighv1-62-201ENSMUST00000193406 350 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm38317-201ENSMUST00000195564 343 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm2965-201ENSMUST00000198365 343 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm42859-201ENSMUST00000199572 193 ntBASIC9.1□□□□□ -0.95
VhlP40338 Gm45224-201ENSMUST00000208203 414 ntBASIC9.1□□□□□ -0.95
VhlP40338 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC9.1□□□□□ -0.95
VhlP40338 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Msh3-201ENSMUST00000022220 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Cstf1-201ENSMUST00000116375 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Trim36-202ENSMUST00000167364 4543 ntTSL 5 BASIC9.1□□□□□ -0.95
VhlP40338 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
VhlP40338 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
VhlP40338 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
VhlP40338 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Flna-201ENSMUST00000033699 8312 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Gm3765-201ENSMUST00000130985 1447 ntBASIC9.09□□□□□ -0.95
VhlP40338 Cyp2c53-ps-203ENSMUST00000176493 1443 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Gm14740-201ENSMUST00000118538 1150 ntBASIC9.09□□□□□ -0.95
VhlP40338 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC9.09□□□□□ -0.95
VhlP40338 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.09□□□□□ -0.95
VhlP40338 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Gm25700-201ENSMUST00000177693 110 ntBASIC9.09□□□□□ -0.95
VhlP40338 Gm28032-201ENSMUST00000184104 96 ntBASIC9.09□□□□□ -0.95
VhlP40338 Gm38000-201ENSMUST00000192390 1215 ntBASIC9.09□□□□□ -0.95
VhlP40338 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC9.09□□□□□ -0.95
VhlP40338 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
VhlP40338 Myo9a-205ENSMUST00000135298 12198 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
VhlP40338 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
VhlP40338 Cfap54-201ENSMUST00000020200 2473 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms