Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 FAM90A12P-201ENST00000519497 2375 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 FAM90A24P-201ENST00000520792 2369 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.62□□□□□ -0.39
CX3CR1P49238 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.62□□□□□ -0.39
CX3CR1P49238 AC026954.1-201ENST00000429771 1293 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 AL645933.1-201ENST00000440087 609 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 CTBP2P5-201ENST00000454986 1264 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC12.62□□□□□ -0.39
CX3CR1P49238 AC005225.4-201ENST00000557330 545 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 DRG2-220ENST00000583355 891 ntTSL 3 BASIC12.62□□□□□ -0.39
CX3CR1P49238 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.62□□□□□ -0.39
CX3CR1P49238 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 MEX3B-202ENST00000558133 4333 ntBASIC12.62□□□□□ -0.39
CX3CR1P49238 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
CX3CR1P49238 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CX3CR1P49238 TP73-211ENST00000604074 4806 ntTSL 5 BASIC12.62□□□□□ -0.39
CX3CR1P49238 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
CX3CR1P49238 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.61□□□□□ -0.39
CX3CR1P49238 AL157407.1-201ENST00000435784 904 ntBASIC12.61□□□□□ -0.39
CX3CR1P49238 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC12.61□□□□□ -0.39
CX3CR1P49238 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 AC100850.1-201ENST00000506768 649 ntBASIC12.61□□□□□ -0.39
CX3CR1P49238 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.61□□□□□ -0.39
CX3CR1P49238 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.61□□□□□ -0.39
CX3CR1P49238 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC12.61□□□□□ -0.39
CX3CR1P49238 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.61□□□□□ -0.39
CX3CR1P49238 AC021016.3-201ENST00000608367 477 ntBASIC12.61□□□□□ -0.39
CX3CR1P49238 AC012645.4-201ENST00000610691 1061 ntBASIC12.61□□□□□ -0.39
CX3CR1P49238 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC12.61□□□□□ -0.39
CX3CR1P49238 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CX3CR1P49238 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
CX3CR1P49238 RGS12-204ENST00000382788 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms