Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AC141586.4-201ENST00000624558 1573 ntBASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 GXYLT1P2-201ENST00000433312 1230 ntBASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 CCDC92B-201ENST00000575506 885 ntBASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC28.89■■■□□ 2.22
RTCBQ9Y3I0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC28.89■■■□□ 2.21
RTCBQ9Y3I0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
RTCBQ9Y3I0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
RTCBQ9Y3I0 AL354811.1-201ENST00000610286 706 ntBASIC28.88■■■□□ 2.21
RTCBQ9Y3I0 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC28.88■■■□□ 2.21
RTCBQ9Y3I0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC28.88■■■□□ 2.21
RTCBQ9Y3I0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
RTCBQ9Y3I0 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC28.87■■■□□ 2.21
RTCBQ9Y3I0 AL161729.1-201ENST00000604104 1402 ntBASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.86■■■□□ 2.21
RTCBQ9Y3I0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 NTF6G-201ENST00000591094 616 ntBASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
RTCBQ9Y3I0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
RTCBQ9Y3I0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.83■■■□□ 2.21
RTCBQ9Y3I0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC28.82■■■□□ 2.2
RTCBQ9Y3I0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RTCBQ9Y3I0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
RTCBQ9Y3I0 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC28.82■■■□□ 2.2
RTCBQ9Y3I0 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC28.81■■■□□ 2.2
RTCBQ9Y3I0 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 CEBPA-AS1-201ENST00000592982 2198 ntBASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 KRT18P14-201ENST00000534205 1250 ntBASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC28.8■■■□□ 2.2
RTCBQ9Y3I0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
RTCBQ9Y3I0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC28.78■■■□□ 2.2
RTCBQ9Y3I0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
RTCBQ9Y3I0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
RTCBQ9Y3I0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
RTCBQ9Y3I0 TERF1P2-201ENST00000583350 1212 ntBASIC28.78■■■□□ 2.2
RTCBQ9Y3I0 ALDH1A3-203ENST00000557963 1670 ntBASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC28.77■■■□□ 2.2
RTCBQ9Y3I0 LINC02228-203ENST00000641970 1355 ntBASIC28.76■■■□□ 2.2
RTCBQ9Y3I0 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms