Protein–RNA interactions for Protein: Q9H2X0

CHRD, Chordin, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDQ9H2X0 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.93■■□□□ 1.26
CHRDQ9H2X0 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 GXYLT1P2-201ENST00000433312 1230 ntBASIC22.92■■□□□ 1.26
CHRDQ9H2X0 VPS53-216ENST00000574029 585 ntTSL 4 BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.92■■□□□ 1.26
CHRDQ9H2X0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.91■■□□□ 1.26
CHRDQ9H2X0 AC141586.4-201ENST00000624558 1573 ntBASIC22.9■■□□□ 1.26
CHRDQ9H2X0 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
CHRDQ9H2X0 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
CHRDQ9H2X0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.89■■□□□ 1.26
CHRDQ9H2X0 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
CHRDQ9H2X0 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 NTF6G-201ENST00000591094 616 ntBASIC22.89■■□□□ 1.25
CHRDQ9H2X0 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 AL161729.1-201ENST00000604104 1402 ntBASIC22.89■■□□□ 1.25
CHRDQ9H2X0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.89■■□□□ 1.25
CHRDQ9H2X0 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 AL121749.1-202ENST00000609313 2153 ntBASIC22.88■■□□□ 1.25
CHRDQ9H2X0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CHRDQ9H2X0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 DUSP8P4-201ENST00000399538 1761 ntBASIC22.87■■□□□ 1.25
CHRDQ9H2X0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 KRT18P14-201ENST00000534205 1250 ntBASIC22.87■■□□□ 1.25
CHRDQ9H2X0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CHRDQ9H2X0 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 TERF1P2-201ENST00000583350 1212 ntBASIC22.86■■□□□ 1.25
CHRDQ9H2X0 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CHRDQ9H2X0 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.85■■□□□ 1.25
CHRDQ9H2X0 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC22.84■■□□□ 1.25
CHRDQ9H2X0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
CHRDQ9H2X0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRDQ9H2X0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRDQ9H2X0 LINC02228-203ENST00000641970 1355 ntBASIC22.84■■□□□ 1.25
CHRDQ9H2X0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CHRDQ9H2X0 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CHRDQ9H2X0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22.83■■□□□ 1.24
CHRDQ9H2X0 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRDQ9H2X0 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRDQ9H2X0 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.82■■□□□ 1.24
CHRDQ9H2X0 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CHRDQ9H2X0 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.82■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms