Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Gm14117-201ENSMUST00000122417 843 ntBASIC21.29■■□□□ 1
Rnf225Q9D7D1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rnf225Q9D7D1 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Rnf225Q9D7D1 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Gm22238-201ENSMUST00000175222 88 ntBASIC21.28■■□□□ 1
Rnf225Q9D7D1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rnf225Q9D7D1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rnf225Q9D7D1 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
Rnf225Q9D7D1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf225Q9D7D1 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf225Q9D7D1 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Notumos-201ENSMUST00000151998 2659 ntBASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf225Q9D7D1 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf225Q9D7D1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf225Q9D7D1 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf225Q9D7D1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf225Q9D7D1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf225Q9D7D1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf225Q9D7D1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf225Q9D7D1 Rps24-207ENSMUST00000224568 714 ntBASIC21.19■□□□□ 0.98
Rnf225Q9D7D1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms