Protein–RNA interactions for Protein: Q9D0F1

Ndc80, Kinetochore protein NDC80 homolog, mousemouse

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80Q9D0F1 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ndc80Q9D0F1 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ndc80Q9D0F1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ndc80Q9D0F1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ndc80Q9D0F1 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 Gm14117-201ENSMUST00000122417 843 ntBASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
Ndc80Q9D0F1 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.45■□□□□ 0.86
Ndc80Q9D0F1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Ndc80Q9D0F1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndc80Q9D0F1 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ndc80Q9D0F1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ndc80Q9D0F1 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Ndc80Q9D0F1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ndc80Q9D0F1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ndc80Q9D0F1 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ndc80Q9D0F1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms