Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Pcdha8Q91Y12 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdha8Q91Y12 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdha8Q91Y12 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdha8Q91Y12 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Gm7143-201ENSMUST00000222811 859 ntBASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Rps24-207ENSMUST00000224568 714 ntBASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pcdha8Q91Y12 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Pcdha8Q91Y12 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdha8Q91Y12 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Gm45102-201ENSMUST00000207427 857 ntBASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdha8Q91Y12 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdha8Q91Y12 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha8Q91Y12 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha8Q91Y12 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms