Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Golph3-205ENSMUST00000228671 2842 ntBASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhb3Q91XZ7 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhb3Q91XZ7 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Gm15546-201ENSMUST00000122095 826 ntBASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Gm45444-201ENSMUST00000211394 898 ntBASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhb3Q91XZ7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhb3Q91XZ7 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb3Q91XZ7 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhb3Q91XZ7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhb3Q91XZ7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
Pcdhb3Q91XZ7 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb3Q91XZ7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb3Q91XZ7 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20■□□□□ 0.79
Pcdhb3Q91XZ7 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdhb3Q91XZ7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Gm13238-201ENSMUST00000117655 780 ntBASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Gm5522-201ENSMUST00000189483 1242 ntBASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdhb3Q91XZ7 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdhb3Q91XZ7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Pcdhb3Q91XZ7 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdhb3Q91XZ7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 128.1 ms