Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Pcdhgb5Q91XX5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb5Q91XX5 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.1■□□□□ 0.81
Pcdhgb5Q91XX5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.1■□□□□ 0.81
Pcdhgb5Q91XX5 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb5Q91XX5 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Pcdhgb5Q91XX5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Pcdhgb5Q91XX5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Pcdhgb5Q91XX5 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Pcdhgb5Q91XX5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Pcdhgb5Q91XX5 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb5Q91XX5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.06■□□□□ 0.8
Pcdhgb5Q91XX5 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb5Q91XX5 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pcdhgb5Q91XX5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pcdhgb5Q91XX5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pcdhgb5Q91XX5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Gm10493-201ENSMUST00000097270 612 ntBASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.04■□□□□ 0.8
Pcdhgb5Q91XX5 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Gm40848-201ENSMUST00000221998 324 ntBASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdhgb5Q91XX5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Smad6-203ENSMUST00000179458 273 ntBASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdhgb5Q91XX5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb5Q91XX5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdhgb5Q91XX5 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Pcdhgb5Q91XX5 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdhgb5Q91XX5 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Pcdhgb5Q91XX5 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms