Protein–RNA interactions for Protein: Q91VE6

Nifk, MKI67 FHA domain-interacting nucleolar phosphoprotein, mousemouse

Known RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NifkQ91VE6 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NifkQ91VE6 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NifkQ91VE6 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NifkQ91VE6 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NifkQ91VE6 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NifkQ91VE6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.69■□□□□ 0.58
NifkQ91VE6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NifkQ91VE6 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NifkQ91VE6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
NifkQ91VE6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.68■□□□□ 0.58
NifkQ91VE6 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.68■□□□□ 0.58
NifkQ91VE6 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
NifkQ91VE6 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
NifkQ91VE6 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NifkQ91VE6 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
NifkQ91VE6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
NifkQ91VE6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NifkQ91VE6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC18.67■□□□□ 0.58
NifkQ91VE6 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
NifkQ91VE6 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.66■□□□□ 0.58
NifkQ91VE6 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NifkQ91VE6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NifkQ91VE6 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NifkQ91VE6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NifkQ91VE6 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NifkQ91VE6 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.65■□□□□ 0.58
NifkQ91VE6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.65■□□□□ 0.58
NifkQ91VE6 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NifkQ91VE6 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NifkQ91VE6 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
NifkQ91VE6 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NifkQ91VE6 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NifkQ91VE6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NifkQ91VE6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
NifkQ91VE6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
NifkQ91VE6 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.63■□□□□ 0.57
NifkQ91VE6 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.63■□□□□ 0.57
NifkQ91VE6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC18.63■□□□□ 0.57
NifkQ91VE6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NifkQ91VE6 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NifkQ91VE6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NifkQ91VE6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NifkQ91VE6 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.61■□□□□ 0.57
NifkQ91VE6 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NifkQ91VE6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms