Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.37■□□□□ 0.37
Tram1Q91V04 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
Tram1Q91V04 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tram1Q91V04 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.35■□□□□ 0.37
Tram1Q91V04 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tram1Q91V04 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tram1Q91V04 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tram1Q91V04 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Tram1Q91V04 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tram1Q91V04 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.35■□□□□ 0.37
Tram1Q91V04 Gm6311-201ENSMUST00000073790 878 ntBASIC17.35■□□□□ 0.37
Tram1Q91V04 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tram1Q91V04 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tram1Q91V04 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.34■□□□□ 0.37
Tram1Q91V04 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tram1Q91V04 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tram1Q91V04 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tram1Q91V04 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tram1Q91V04 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tram1Q91V04 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tram1Q91V04 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC17.33■□□□□ 0.36
Tram1Q91V04 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tram1Q91V04 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tram1Q91V04 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.32■□□□□ 0.36
Tram1Q91V04 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.32■□□□□ 0.36
Tram1Q91V04 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.32■□□□□ 0.36
Tram1Q91V04 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tram1Q91V04 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
Tram1Q91V04 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.31■□□□□ 0.36
Tram1Q91V04 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.31■□□□□ 0.36
Tram1Q91V04 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.31■□□□□ 0.36
Tram1Q91V04 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Gm9806-201ENSMUST00000051080 552 ntBASIC17.31■□□□□ 0.36
Tram1Q91V04 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.31■□□□□ 0.36
Tram1Q91V04 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Tram1Q91V04 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tram1Q91V04 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.3■□□□□ 0.36
Tram1Q91V04 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Tram1Q91V04 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.3■□□□□ 0.36
Tram1Q91V04 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tram1Q91V04 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tram1Q91V04 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Tram1Q91V04 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Tram1Q91V04 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.29■□□□□ 0.36
Tram1Q91V04 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
Tram1Q91V04 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tram1Q91V04 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tram1Q91V04 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms