Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lgi3Q8K406 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lgi3Q8K406 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lgi3Q8K406 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Lgi3Q8K406 Gm43566-201ENSMUST00000196851 808 ntBASIC17.33■□□□□ 0.36
Lgi3Q8K406 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Lgi3Q8K406 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lgi3Q8K406 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Lgi3Q8K406 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.32■□□□□ 0.36
Lgi3Q8K406 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Lgi3Q8K406 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Lgi3Q8K406 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Lgi3Q8K406 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Lgi3Q8K406 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Lgi3Q8K406 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.29■□□□□ 0.36
Lgi3Q8K406 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.29■□□□□ 0.36
Lgi3Q8K406 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Lgi3Q8K406 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.28■□□□□ 0.36
Lgi3Q8K406 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Lgi3Q8K406 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.27■□□□□ 0.36
Lgi3Q8K406 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Lgi3Q8K406 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
Lgi3Q8K406 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lgi3Q8K406 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Lgi3Q8K406 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Lgi3Q8K406 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.26■□□□□ 0.35
Lgi3Q8K406 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Lgi3Q8K406 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Lgi3Q8K406 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.24■□□□□ 0.35
Lgi3Q8K406 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgi3Q8K406 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Lgi3Q8K406 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Lgi3Q8K406 Gm10399-202ENSMUST00000202768 748 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms