Protein–RNA interactions for Protein: Q8K3D3

Swi5, DNA repair protein SWI5 homolog, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swi5Q8K3D3 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Gm16437-201ENSMUST00000025669 507 ntBASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Swi5Q8K3D3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Swi5Q8K3D3 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Swi5Q8K3D3 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.27■□□□□ 0.52
Swi5Q8K3D3 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Swi5Q8K3D3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Swi5Q8K3D3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Swi5Q8K3D3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Swi5Q8K3D3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.24■□□□□ 0.51
Swi5Q8K3D3 AC151971.4-201ENSMUST00000214717 704 ntBASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Swi5Q8K3D3 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Swi5Q8K3D3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Gm11687-201ENSMUST00000118911 886 ntBASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Swi5Q8K3D3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.22■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms