Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CroccQ8CJ40 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.41■□□□□ 0.7
CroccQ8CJ40 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CroccQ8CJ40 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
CroccQ8CJ40 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CroccQ8CJ40 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CroccQ8CJ40 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CroccQ8CJ40 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CroccQ8CJ40 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CroccQ8CJ40 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.39■□□□□ 0.7
CroccQ8CJ40 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CroccQ8CJ40 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CroccQ8CJ40 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CroccQ8CJ40 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CroccQ8CJ40 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CroccQ8CJ40 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CroccQ8CJ40 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CroccQ8CJ40 Gm12922-201ENSMUST00000120626 809 ntBASIC19.37■□□□□ 0.69
CroccQ8CJ40 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CroccQ8CJ40 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CroccQ8CJ40 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CroccQ8CJ40 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.36■□□□□ 0.69
CroccQ8CJ40 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CroccQ8CJ40 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.35■□□□□ 0.69
CroccQ8CJ40 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.35■□□□□ 0.69
CroccQ8CJ40 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CroccQ8CJ40 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CroccQ8CJ40 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.34■□□□□ 0.69
CroccQ8CJ40 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CroccQ8CJ40 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CroccQ8CJ40 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
CroccQ8CJ40 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CroccQ8CJ40 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.33■□□□□ 0.69
CroccQ8CJ40 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CroccQ8CJ40 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.33■□□□□ 0.68
CroccQ8CJ40 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
CroccQ8CJ40 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CroccQ8CJ40 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CroccQ8CJ40 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms