Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Trim35Q8C006 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trim35Q8C006 Gm38116-201ENSMUST00000193873 1533 ntBASIC20.43■□□□□ 0.86
Trim35Q8C006 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.42■□□□□ 0.86
Trim35Q8C006 Gm43377-201ENSMUST00000201640 455 ntBASIC20.42■□□□□ 0.86
Trim35Q8C006 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim35Q8C006 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.42■□□□□ 0.86
Trim35Q8C006 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Trim35Q8C006 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trim35Q8C006 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Gm12813-201ENSMUST00000119615 902 ntBASIC20.41■□□□□ 0.86
Trim35Q8C006 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.41■□□□□ 0.86
Trim35Q8C006 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trim35Q8C006 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trim35Q8C006 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim35Q8C006 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim35Q8C006 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.4■□□□□ 0.86
Trim35Q8C006 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Trim35Q8C006 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.4■□□□□ 0.86
Trim35Q8C006 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.4■□□□□ 0.86
Trim35Q8C006 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim35Q8C006 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim35Q8C006 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trim35Q8C006 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Trim35Q8C006 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Trim35Q8C006 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.39■□□□□ 0.86
Trim35Q8C006 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim35Q8C006 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Trim35Q8C006 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim35Q8C006 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Trim35Q8C006 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim35Q8C006 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim35Q8C006 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trim35Q8C006 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Trim35Q8C006 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trim35Q8C006 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim35Q8C006 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trim35Q8C006 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim35Q8C006 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.37■□□□□ 0.85
Trim35Q8C006 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim35Q8C006 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trim35Q8C006 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trim35Q8C006 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Trim35Q8C006 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Trim35Q8C006 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trim35Q8C006 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Gm22238-201ENSMUST00000175222 88 ntBASIC20.36■□□□□ 0.85
Trim35Q8C006 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim35Q8C006 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trim35Q8C006 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Trim35Q8C006 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Gm37965-201ENSMUST00000195304 1362 ntBASIC20.35■□□□□ 0.85
Trim35Q8C006 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.35■□□□□ 0.85
Trim35Q8C006 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.35■□□□□ 0.85
Trim35Q8C006 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
Trim35Q8C006 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Trim35Q8C006 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trim35Q8C006 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Trim35Q8C006 Gm29590-201ENSMUST00000190396 1304 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim35Q8C006 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.34■□□□□ 0.85
Trim35Q8C006 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.34■□□□□ 0.85
Trim35Q8C006 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trim35Q8C006 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms