Protein–RNA interactions for Protein: Q86T96

RNF180, E3 ubiquitin-protein ligase RNF180, humanhuman

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF180Q86T96 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
RNF180Q86T96 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC25.31■■□□□ 1.64
RNF180Q86T96 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF180Q86T96 MIR572-201ENST00000384983 95 ntBASIC25.31■■□□□ 1.64
RNF180Q86T96 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC25.31■■□□□ 1.64
RNF180Q86T96 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
RNF180Q86T96 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
RNF180Q86T96 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
RNF180Q86T96 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF180Q86T96 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF180Q86T96 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC25.3■■□□□ 1.64
RNF180Q86T96 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC25.3■■□□□ 1.64
RNF180Q86T96 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF180Q86T96 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.3■■□□□ 1.64
RNF180Q86T96 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC25.3■■□□□ 1.64
RNF180Q86T96 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC25.3■■□□□ 1.64
RNF180Q86T96 AC004911.1-201ENST00000416316 871 ntBASIC25.3■■□□□ 1.64
RNF180Q86T96 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF180Q86T96 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
RNF180Q86T96 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC25.3■■□□□ 1.64
RNF180Q86T96 AL354811.1-201ENST00000610286 706 ntBASIC25.3■■□□□ 1.64
RNF180Q86T96 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC25.3■■□□□ 1.64
RNF180Q86T96 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC25.3■■□□□ 1.64
RNF180Q86T96 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF180Q86T96 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.3■■□□□ 1.64
RNF180Q86T96 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC25.29■■□□□ 1.64
RNF180Q86T96 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC25.29■■□□□ 1.64
RNF180Q86T96 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC25.29■■□□□ 1.64
RNF180Q86T96 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC25.29■■□□□ 1.64
RNF180Q86T96 AC012414.1-201ENST00000556676 535 ntBASIC25.29■■□□□ 1.64
RNF180Q86T96 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.29■■□□□ 1.64
RNF180Q86T96 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
RNF180Q86T96 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF180Q86T96 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC25.28■■□□□ 1.64
RNF180Q86T96 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC25.28■■□□□ 1.64
RNF180Q86T96 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC25.28■■□□□ 1.64
RNF180Q86T96 MIR6084-201ENST00000622012 110 ntBASIC25.28■■□□□ 1.64
RNF180Q86T96 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
RNF180Q86T96 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC25.28■■□□□ 1.64
RNF180Q86T96 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF180Q86T96 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
RNF180Q86T96 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.27■■□□□ 1.64
RNF180Q86T96 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.27■■□□□ 1.64
RNF180Q86T96 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC25.27■■□□□ 1.64
RNF180Q86T96 GXYLT1P2-201ENST00000433312 1230 ntBASIC25.27■■□□□ 1.64
RNF180Q86T96 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC25.26■■□□□ 1.63
RNF180Q86T96 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC25.26■■□□□ 1.63
RNF180Q86T96 DLX3-202ENST00000512495 834 ntTSL 2 BASIC25.26■■□□□ 1.63
RNF180Q86T96 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC25.26■■□□□ 1.63
RNF180Q86T96 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC25.26■■□□□ 1.63
RNF180Q86T96 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RNF180Q86T96 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RNF180Q86T96 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC25.25■■□□□ 1.63
RNF180Q86T96 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC25.25■■□□□ 1.63
RNF180Q86T96 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
RNF180Q86T96 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.24■■□□□ 1.63
RNF180Q86T96 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 ALDH1A3-203ENST00000557963 1670 ntBASIC25.24■■□□□ 1.63
RNF180Q86T96 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC25.24■■□□□ 1.63
RNF180Q86T96 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 CCDC92B-201ENST00000575506 885 ntBASIC25.24■■□□□ 1.63
RNF180Q86T96 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RNF180Q86T96 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF180Q86T96 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
RNF180Q86T96 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF180Q86T96 ID1-201ENST00000376105 1233 ntBASIC25.23■■□□□ 1.63
RNF180Q86T96 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.23■■□□□ 1.63
RNF180Q86T96 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF180Q86T96 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC25.23■■□□□ 1.63
RNF180Q86T96 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
RNF180Q86T96 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.23■■□□□ 1.63
RNF180Q86T96 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RNF180Q86T96 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
RNF180Q86T96 NTF6G-201ENST00000591094 616 ntBASIC25.22■■□□□ 1.63
RNF180Q86T96 DUSP8P4-201ENST00000399538 1761 ntBASIC25.22■■□□□ 1.63
RNF180Q86T96 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC25.22■■□□□ 1.63
RNF180Q86T96 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF180Q86T96 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF180Q86T96 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF180Q86T96 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RNF180Q86T96 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
RNF180Q86T96 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC25.21■■□□□ 1.63
RNF180Q86T96 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.21■■□□□ 1.63
RNF180Q86T96 AC133637.1-201ENST00000624115 1537 ntBASIC25.21■■□□□ 1.63
RNF180Q86T96 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms