Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Spcs1-204ENSMUST00000226782 949 ntBASIC18.64■□□□□ 0.57
Pif1Q80SX8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.63■□□□□ 0.57
Pif1Q80SX8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pif1Q80SX8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
Pif1Q80SX8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pif1Q80SX8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Gm29257-201ENSMUST00000186115 639 ntBASIC18.61■□□□□ 0.57
Pif1Q80SX8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Pif1Q80SX8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Gm43060-201ENSMUST00000200621 289 ntBASIC18.6■□□□□ 0.57
Pif1Q80SX8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Pif1Q80SX8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.59■□□□□ 0.57
Pif1Q80SX8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.59■□□□□ 0.57
Pif1Q80SX8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Pif1Q80SX8 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Pif1Q80SX8 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.58■□□□□ 0.57
Pif1Q80SX8 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Pif1Q80SX8 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Pif1Q80SX8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Gm10493-201ENSMUST00000097270 612 ntBASIC18.56■□□□□ 0.56
Pif1Q80SX8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Pif1Q80SX8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.55■□□□□ 0.56
Pif1Q80SX8 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Pif1Q80SX8 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms