Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Shcbp1lQ3TTP0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shcbp1lQ3TTP0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Shcbp1lQ3TTP0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Shcbp1lQ3TTP0 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.33■□□□□ 0.85
Shcbp1lQ3TTP0 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shcbp1lQ3TTP0 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Shcbp1lQ3TTP0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Shcbp1lQ3TTP0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Shcbp1lQ3TTP0 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.33■□□□□ 0.84
Shcbp1lQ3TTP0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.33■□□□□ 0.84
Shcbp1lQ3TTP0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Shcbp1lQ3TTP0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Shcbp1lQ3TTP0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Shcbp1lQ3TTP0 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Serp2-204ENSMUST00000228055 705 ntBASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Shcbp1lQ3TTP0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Shcbp1lQ3TTP0 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Shcbp1lQ3TTP0 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.27■□□□□ 0.84
Shcbp1lQ3TTP0 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Shcbp1lQ3TTP0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Shcbp1lQ3TTP0 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Mir7075-201ENSMUST00000184187 82 ntBASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Shcbp1lQ3TTP0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Gm6139-201ENSMUST00000079261 882 ntBASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shcbp1lQ3TTP0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shcbp1lQ3TTP0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms