Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Pfdn2O70591 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC16.67■□□□□ 0.26
Pfdn2O70591 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pfdn2O70591 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Pfdn2O70591 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Pfdn2O70591 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Pfdn2O70591 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Pfdn2O70591 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC16.65■□□□□ 0.26
Pfdn2O70591 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Pfdn2O70591 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC16.64■□□□□ 0.25
Pfdn2O70591 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Pfdn2O70591 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Pfdn2O70591 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC16.64■□□□□ 0.25
Pfdn2O70591 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Pfdn2O70591 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn2O70591 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn2O70591 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Pfdn2O70591 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Pfdn2O70591 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.62■□□□□ 0.25
Pfdn2O70591 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC16.62■□□□□ 0.25
Pfdn2O70591 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Pfdn2O70591 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.61■□□□□ 0.25
Pfdn2O70591 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pfdn2O70591 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Pfdn2O70591 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Pfdn2O70591 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Pfdn2O70591 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Pfdn2O70591 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Pfdn2O70591 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms