Protein–RNA interactions for Protein: O70157

Top3a, DNA topoisomerase 3-alpha, mousemouse

Predictions only

Length 1,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top3aO70157 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Top3aO70157 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.27■□□□□ 0.84
Top3aO70157 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Top3aO70157 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
Top3aO70157 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Top3aO70157 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Top3aO70157 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top3aO70157 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.26■□□□□ 0.83
Top3aO70157 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.26■□□□□ 0.83
Top3aO70157 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top3aO70157 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.26■□□□□ 0.83
Top3aO70157 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top3aO70157 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Top3aO70157 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.25■□□□□ 0.83
Top3aO70157 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top3aO70157 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top3aO70157 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Top3aO70157 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.25■□□□□ 0.83
Top3aO70157 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Top3aO70157 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top3aO70157 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top3aO70157 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top3aO70157 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Top3aO70157 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.23■□□□□ 0.83
Top3aO70157 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.23■□□□□ 0.83
Top3aO70157 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.23■□□□□ 0.83
Top3aO70157 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top3aO70157 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Top3aO70157 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Top3aO70157 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Top3aO70157 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.22■□□□□ 0.83
Top3aO70157 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.22■□□□□ 0.83
Top3aO70157 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Top3aO70157 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.22■□□□□ 0.83
Top3aO70157 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Top3aO70157 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Top3aO70157 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Top3aO70157 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Etf1-202ENSMUST00000180351 108 ntBASIC20.21■□□□□ 0.83
Top3aO70157 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Top3aO70157 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Top3aO70157 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.2■□□□□ 0.82
Top3aO70157 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Top3aO70157 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.2■□□□□ 0.82
Top3aO70157 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Gm7417-201ENSMUST00000192950 473 ntBASIC20.19■□□□□ 0.82
Top3aO70157 Gm9959-201ENSMUST00000068277 390 ntBASIC20.19■□□□□ 0.82
Top3aO70157 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Top3aO70157 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Top3aO70157 Iqck-206ENSMUST00000208658 2891 ntBASIC20.18■□□□□ 0.82
Top3aO70157 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.18■□□□□ 0.82
Top3aO70157 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Top3aO70157 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Top3aO70157 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Top3aO70157 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Top3aO70157 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top3aO70157 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top3aO70157 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top3aO70157 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Top3aO70157 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Top3aO70157 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms