Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col15a1O35206 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col15a1O35206 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Col15a1O35206 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC26.4■■□□□ 1.82
Col15a1O35206 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Col15a1O35206 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Col15a1O35206 Gm18671-201ENSMUST00000214826 683 ntBASIC26.39■■□□□ 1.82
Col15a1O35206 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
Col15a1O35206 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.81
Col15a1O35206 CT025689.6-201ENSMUST00000224991 1104 ntBASIC26.38■■□□□ 1.81
Col15a1O35206 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col15a1O35206 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Col15a1O35206 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Col15a1O35206 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col15a1O35206 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC26.37■■□□□ 1.81
Col15a1O35206 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
Col15a1O35206 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Col15a1O35206 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Col15a1O35206 Gm11421-201ENSMUST00000122124 294 ntBASIC26.36■■□□□ 1.81
Col15a1O35206 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC26.36■■□□□ 1.81
Col15a1O35206 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Col15a1O35206 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC26.36■■□□□ 1.81
Col15a1O35206 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Col15a1O35206 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC26.35■■□□□ 1.81
Col15a1O35206 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC26.35■■□□□ 1.81
Col15a1O35206 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Col15a1O35206 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC26.34■■□□□ 1.81
Col15a1O35206 Gm27011-201ENSMUST00000182352 972 ntBASIC26.34■■□□□ 1.81
Col15a1O35206 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC26.34■■□□□ 1.81
Col15a1O35206 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
Col15a1O35206 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
Col15a1O35206 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC26.33■■□□□ 1.81
Col15a1O35206 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC26.33■■□□□ 1.81
Col15a1O35206 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
Col15a1O35206 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC26.33■■□□□ 1.8
Col15a1O35206 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col15a1O35206 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col15a1O35206 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col15a1O35206 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.8
Col15a1O35206 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC26.32■■□□□ 1.8
Col15a1O35206 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Col15a1O35206 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col15a1O35206 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
Col15a1O35206 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Col15a1O35206 Gm5913-201ENSMUST00000119397 1399 ntBASIC26.3■■□□□ 1.8
Col15a1O35206 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col15a1O35206 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
Col15a1O35206 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Col15a1O35206 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Col15a1O35206 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC26.28■■□□□ 1.8
Col15a1O35206 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col15a1O35206 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col15a1O35206 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
Col15a1O35206 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col15a1O35206 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Col15a1O35206 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC26.27■■□□□ 1.8
Col15a1O35206 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC26.27■■□□□ 1.8
Col15a1O35206 AC112142.1-201ENSMUST00000228796 918 ntBASIC26.27■■□□□ 1.8
Col15a1O35206 Gm44949-201ENSMUST00000206423 1450 ntBASIC26.27■■□□□ 1.8
Col15a1O35206 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
Col15a1O35206 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col15a1O35206 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC26.26■■□□□ 1.79
Col15a1O35206 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Col15a1O35206 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Col15a1O35206 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Col15a1O35206 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Col15a1O35206 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC26.25■■□□□ 1.79
Col15a1O35206 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col15a1O35206 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Col15a1O35206 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Col15a1O35206 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
Col15a1O35206 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms