Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx4O35137 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.06■□□□□ 0.48
Alx4O35137 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx4O35137 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Alx4O35137 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Alx4O35137 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Alx4O35137 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx4O35137 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx4O35137 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC18.05■□□□□ 0.48
Alx4O35137 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx4O35137 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.05■□□□□ 0.48
Alx4O35137 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Alx4O35137 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Alx4O35137 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Alx4O35137 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Alx4O35137 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Alx4O35137 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Alx4O35137 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.04■□□□□ 0.48
Alx4O35137 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.04■□□□□ 0.48
Alx4O35137 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Alx4O35137 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.03■□□□□ 0.48
Alx4O35137 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Alx4O35137 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Alx4O35137 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Alx4O35137 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Alx4O35137 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Alx4O35137 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Alx4O35137 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Alx4O35137 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Alx4O35137 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Alx4O35137 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Alx4O35137 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Alx4O35137 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Alx4O35137 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Alx4O35137 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.01■□□□□ 0.47
Alx4O35137 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18■□□□□ 0.47
Alx4O35137 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Alx4O35137 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Alx4O35137 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Alx4O35137 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Alx4O35137 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Alx4O35137 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Alx4O35137 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Alx4O35137 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Alx4O35137 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.98■□□□□ 0.47
Alx4O35137 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.98■□□□□ 0.47
Alx4O35137 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.98■□□□□ 0.47
Alx4O35137 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Alx4O35137 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.97■□□□□ 0.47
Alx4O35137 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.97■□□□□ 0.47
Alx4O35137 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx4O35137 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Alx4O35137 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.97■□□□□ 0.47
Alx4O35137 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Alx4O35137 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.97■□□□□ 0.47
Alx4O35137 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx4O35137 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Alx4O35137 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.96■□□□□ 0.47
Alx4O35137 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Alx4O35137 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.96■□□□□ 0.47
Alx4O35137 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Alx4O35137 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Alx4O35137 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Alx4O35137 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Alx4O35137 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms